Formatted example

Returns an example of summary stats that have had their column names already standardised with standardise_header.

formatted_example(
  path = system.file("extdata", "eduAttainOkbay.txt", package = "MungeSumstats"),
  formatted = TRUE,
  sorted = TRUE
)

Arguments

path

Path to raw example file. Default to built-in dataset.

formatted

Whether the column names should be formatted (default:TRUE).

sorted

Whether the rows should be sorted by genomic coordinates (default:TRUE).

Value

sumstats_dt

Examples

sumstats_dt <- MungeSumstats::formatted_example()
#> Standardising column headers.
#> First line of summary statistics file: 
#> MarkerName	CHR	POS	A1	A2	EAF	Beta	SE	Pval	
#> Sorting coordinates.